GORetriever


GORetriever is used to find all of the GO annotations in AgBase corresponding to a list of user-supplied protein identifiers. Currently supported ID types are Uniprot ID, Uniprot Accession, and GO ID. The IDs should be in a text file with one ID per line. The user can get GO annotations from a specific organism or from several. To speed up the process, it is best to select a specific database. GORetriever produces a list of proteins and their annotations and a separate list of entries with no GO annotation. The list without GO annotations can be subsequently used as in put for the GOanna tool that finds similar sequences with annotations (where they are available).
For example: DataBase: ChickGO
Query Type: Uniprot ID
File Content:
41_chick
tom1_chick


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   File to Upload:
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