GOSlimViewer is used to provide a high level summary of functions for a dataset. It is designed to use output generated by GORetriever. Note that you can add additional annotations that come from GOAnna (or other sources) to the GORetriever file. GOSlimViewer currently only supports the listed GOSlim sets.
To view a sample input file for GOSlimViewer click here.
The output of GOSlimViewer is a text file that can be charted in Excel
to obtain publication quality figures. Note that records without annotation are not analyzed by GOSlimViewer.
More information about the tool can be found here.
Fiona M McCarthy*, Nan Wang*, G Bryce Magee, Bindu Nanduri, Mark L Lawrence, Evelyn B Camon, Daniel G Barrell, David P Hill, Mary E Dolan, W Paul Williams, Dawn S Luthe, Susan M Bridges* and Shane C Burgess*. 2006. AgBase: a functional genomics resource for agriculture. BMC Genomics 2006, 7:229